BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006E11SP1|AL425557
(569 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1469 400 e-111
>3x_Contig1469
Length = 9240
Score = 400 bits (189), Expect = e-111
Identities = 270/309 (87%), Gaps = 2/309 (0%)
Strand = Plus / Minus
Query: 1 aatccacatatggtaaatatgatgaagatctgggagaatggatttggagcaactgcgtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4992 aatccacatatggtaaatatgatgaagatctgggagaatggatttggagcaactgcgtac 4933
Query: 61 aggtgggagacaaattcttccatgccacttgttattatgaggcagctaaaagtcaacagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4932 aggtgggagacaaattcttccatgccacttgttattatgaggcagctaaaagtcaacagt 4873
Query: 121 caaacacctcctcatctccatcaawacaaaaaawamaawaagatcttggtatwtttcmcg 180
||||||||||||||||||||||| ||||| || |||||||||||| ||| ||
Sbjct: 4872 caaacacctcctcatctccatcattccaaaatcttcaattagatcttggtatttttaacg 4813
Query: 181 agstkvtwccatgagtwgatgamtagctagtgctgctcccttgtctattcgacctctmgt 240
|| | | | |||||| ||||| |||||||||||| || |||| ||||||| |||| ||
Sbjct: 4812 agctgcttcaatgagttgatgaatagctagtgctgatcaattgtatattcgaactctagt 4753
Query: 241 tgagcttmtcgagcmtgaatttcgamccattttcttctmccaattwcgtwcwaaawkgaa 300
|| |||| ||| || ||||||||| |||||||||||| | |||| ||| | ||| |||
Sbjct: 4752 tg-gcttatcg-gcatgaatttcgtaccattttcttctacaaatttcgttctaaatggaa 4695
Query: 301 gtacgaata 309
|||||||||
Sbjct: 4694 gtacgaata 4686
Score = 218 bits (103), Expect = 8e-57
Identities = 137/153 (89%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 410 takaaktkctttkkattttktttttcttcttacgggaattctttatctcgncacgctnnn 469
|| || | |||| ||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 4585 tagaagtgctttggattttgtttttcttcttacgggaattctttatctcgacacgcttta 4526
Query: 470 attcgggtcacgttccttcgactcagcttggttcttcaaaatagcggtaagtttcttgac 529
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4525 attcggatcacgttccttcgactcagcttggttcttcaaaatagcggtaagtttcttg-c 4467
Query: 530 gtaccttcagtaaccgaccgctkgtttctttga 562
|| |||||||||||||| || | ||||||||||
Sbjct: 4466 gttccttcagtaaccgaacgatggtttctttga 4434
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.47 0.725 1.38
Gapped
Lambda K H
1.47 0.725 1.38
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2309
Number of Sequences: 1807
Number of extensions: 2309
Number of successful extensions: 190
Number of sequences better than 1.0e-20: 1
length of query: 569
length of database: 10,358,551
effective HSP length: 15
effective length of query: 554
effective length of database: 10,331,446
effective search space: 5723621084
effective search space used: 5723621084
T: 0
A: 40
X1: 5 (10.6 bits)
X2: 14 (29.7 bits)
S1: 11 (23.8 bits)
S2: 47 (100.0 bits)